The Infectious Disease Fellowship at the University of Iowa Hospitals and Clinics has the following aims:
IProgram Overview slide presenttion (pdf).
Judy Streit, MD, discusses the research experience for fellows
Benjamin Appenheimer, MD, discusses the clinical experience for fellows
Infectious Disease Grand Rounds (weekly): Two cases are presented by the fellows or staff as unknowns, discussed, and pertinent literature reviewed
Clinical training usually is concentrated in the first year of the program. Clinical assignments occur primarily at University of Iowa Hospitals & Clinics (UIHC). Some rotations occur at the Iowa City VA Health Care System which is located across the street. Transplant ID and HIV Care are critical components of the fellow experience.
The Infectious Diseases Fellowship Program at the University of Iowa is ACGME accredited for two years, at the end of which the fellow will meet ABIM eligibility requirements.
Clinical training is concentrated in the first year of the program. Clinical rotations occur primarily at University of Iowa Hospitals & Clinics and with lesser activity at the Iowa City VA Medical Center, which is located across the street from UI Hospitals & Clinics.
Fellows will develop expertise in the evaluation and management of patients with the following disorders, clinical situations and related needs:
Clinical/Clinician-Educator Track: to prepare fellows for a career as an ID consultant and educator either in a private or academic setting:
This track prepares fellows for Infectious Disease careers with special emphasis in hospital epidemiology, health services research or healthcare quality, including antimicrobial stewardship. It is anticipated that the majority of fellows who select this track are interested in an academic career. Features of this track include the following (below). Components selected would depend on the professional goals of the individual trainee.
Physician Investigator Track: to prepare fellows for careers in ID-related laboratory science or clinical investigation.
During the first year the fellow will receive in-depth education in clinical infectious diseases. About 2/3 of required clinical rotations occur in Year 1. Clinical rotations occur primarily at the University of Iowa Hospitals & Clinics. Some occur at the VA Medical Center (VAMC), which is located across the street from UI Hospitals & Clinics. Rotations in Transplant ID, Antimicrobial Stewardship and Hospital Epidemiology are part of the curriculum. Fellows have weekly COC clinics (alternating between HIV and general ID) and may attend several Travel clinics when not on service. The fellow will participate in ID Grand Rounds, core curriculum conferences, Journal Club, ID Faculty and Fellows’ conference and departmental fellows’ interdisciplinary conference. During this first year, each fellow selects a faculty mentor(s) and scholarly project(s). The mentor will guide the fellows’ scholarly work and development during the second year and possibly third and fourth research years.
Goals and Objectives
During this rotation, the first-year fellow is expected to:
Goals and Objectives
During this rotation, the first year fellow is expected to:
Goals and Objectives
During this rotation, the first-year fellow:
The goals of the year 1 rotation and year 2 elective are to give the fellows practical and scholarly training in Antimicrobial Stewardship
Trainees will participate in Antimicrobial Stewardship (AMS) at University of Iowa Hospitals & Clinics and the VA Hospital, joining the physician-pharmacy teams in their patient reviews and communication with teams. Didactic instruction strengthens AMS expertise gained.
Fellows will participate in the IDSA basic and advanced AMS curricula.
Two to four weeks will be spent in the clinical microbiology laboratory with intensive instruction and hands-on experience with a clinical microbiologist. In addition, twice-weekly medical micro tutorials occur for Team 1 members; all fellows are invited.
Goals and Objectives
By the end of this rotation, the fellow is expected to:
Teaching Methods
Daily plate rounds with the Clinical Microbiology Lab: Complete bench rotations on checklist. Work with pathology resident on service to organize Micro tutorials with the ID consult Team 1.
Microbiology lecture block, monthly Pathology Department micro conference.
Fellows see patients in follow-up who were previously seen by the inpatient consult service, as well as evaluate new outpatient ID consults in this every other week clinic.
Goals and Objectives:
Four weeks will be spent on the ID Transplant service during year 1. Additional elective rotations are available.
Goals and Objectives
By the end of this rotation, the fellow is expected to:
Mix of Clinical Topics
There are on average about 25-30 inpatient and 6 outpatient consults per month.
Goals and Objectives
Teaching Methods
Mix of Clinical Topics
There are usually 40-60 new travel clinic visits per month at UI Hospitals & Clinics. Patients traveling to countries all over the world are seen for pre-travel recommendations.
Patient Characteristics and types of clinical encounters, procedures and services:
Reading/Learning Lists
Evaluation
Immediate feedback is given on each patient presentation. Written evaluations by the Travel clinic attendings are given biannually.
Over 600 patients are provided HIV care in the Virology Clinic, part of the Ryan White Program. An integrated multidisciplinary model is used to manage the complex needs that may be encountered. Fellows gain experience by managing a panel of patients whom they follow during their fellowship.
Goals and Objectives:
The goals of the year 1 rotation and year 2 elective are to give the fellows practical and scholarly training in Hospital Epidemiology/Infection Control.
During the Hospital Epidemiology rotation, fellows will participate in multiple activities of the Program of Infection Prevention at UIHC. The goal is to understand the principles of surveillance and experience a programmatic approach to infection prevention, quality improvement and outbreak investigation. We anticipate this experience will ignite ideas for scholarly work/Quality Improvement.
Fellows complete one of the following: a) SHEA online infection control course (Primer on Healthcare Epidemiology, Infection Control & Antimicrobial Stewardship); or b) SHEA spring or fall meeting in infection prevention
Year 2 of fellowship provides considerable flexibility to engage in specialty training pertinent to the track chosen by the fellow (see discussion of tracks and schedule above for pertinent training opportunities). This includes time to perform a scholarly project, overseen by a faculty mentor and assisted by other faculty. Scholarly projects may be completed in areas of health services research, hospital epidemiology/infection prevention, quality improvement (including antimicrobial stewardship), clinical investigation, clinical microbiology, vaccine trials, clinical reviews or case series or in the basic sciences. Approximately 4 months are spent on Teams 1, 2, 4/D, Transplant or specialty rotations. Additional elective rotations are available. The fellow will continue to participate in curriculum conferences, Journal Club, ID Grand Rounds, Clinical Microbiology rounds, ID Faculty and Fellows’ conference and fellows’ interdisciplinary conference. The SHEA online fellows’ curriculum is completed. There are clinical experiences for the management of viral hepatitis and travel medicine. Quality Improvement modules are completed.
Goals and Objectives
During this rotation, the second year fellow is expected to:
Goals and Objectives
During this rotation, the second year fellow is expected to:
Goals and Objectives
During this rotation, the second-year fellow:
One rotation will be spent on the ID Transplant service during year 2. Additional elective rotations are available.
Goals and Objectives
By the end of this rotation, the fellow is expected to:
Mix of Clinical Topics
There are on average about 25-30 inpatient and 6 outpatient consults per month.
The goals of the year 1 rotation and year 2 elective are to give the fellows practical and scholarly training in Antimicrobial Stewardship
Trainees will participate in Antimicrobial Stewardship (AMS) at University of Iowa Hospitals & Clinics and the VA Hospital, joining the physician-pharmacy teams in their patient reviews and communication with teams. Didactic instruction strengthens AMS expertise gained.
Fellows will participate in the IDSA basic and advanced AMS curricula.
Fellows see patients in follow-up who were previously seen by the inpatient consult service, as well as evaluate new outpatient ID consults in this every other week clinic.
Goals and Objectives:
Be familiar with management of outpatient IV antibiotics
Be familiar with the natural course of infections that require treatment for multiple weeks or resolve over lengthy periods of time
Recognize when the course of illness indicates possible complication of therapy or a suboptimal response that warrants further evaluation or change in therapy
Gain experience in outpatient evaluation and management of Infectious Diseases
Each fellow will have 5 to 6 half-day clinics during the second year of training.
Goals and Objectives
By the end of this rotation, the fellow is expected to:
Establish an appropriate and logical work up of viral hepatitis
Understand risks and benefits of obtaining a liver biopsy
Understand the principles of and indications for anti-viral therapy in this patient population
Understand the drug interactions, toxicities, and mechanisms of action of anti-viral agents used for treatment of viral hepatitis
Demonstrate appropriate inpatient and outpatient follow up care for this patient population
Communicate effectively with the referring services, both verbally and in the medical record
Teaching Methods
A hepatology attending is present for each patient encounter, reviews the relevant history and treatment plans. Assessment, plans and encounter notes are reviewed.
Elective rotations will be available on the ID ortho service.
Goals and Objectives
By the end of this rotation, the fellow is expected to:
Mix of Clinical Topics
There are on average about 5-10 inpatient and 4-8 scheduled outpatient consults per week from the orthopedic service. The fellow is expected to attend at least 1 outpatient ortho-ID clinic per week while undertaking this rotation.
Each fellow will have 4 to 6 half-day Travel clinics during the second year of training.
Goals and Objectives
To gain facility in counseling and providing vaccines and medications for patients traveling to international destinations.
Over 600 patients are provided HIV care in the University of Iowa Hospitals & Clinics Virology Clinic. An integrated multidisciplinary model is used to manage the complex needs that may be encountered. Fellows gain experience by managing a panel of patients whom they follow during their fellowship.
Goals and Objectives:
The goals of the year 1 rotation and year 2 elective are to give the fellows practical and scholarly training in Hospital Epidemiology/Infection Control.
During the Hospital Epidemiology rotation, fellows will participate in multiple activities of the Program of Infection Prevention at UIHC. The goal is to understand the principles of surveillance and experience a programmatic approach to infection prevention, quality improvement and outbreak investigation. We anticipate this experience will ignite ideas for scholarly work/Quality Improvement.
Fellows complete one of the following: a) SHEA online infection control course (Primer on Healthcare Epidemiology, Infection Control & Antimicrobial Stewardship); or b) SHEA spring or fall meeting in infection prevention
During the second year, the Clinical Microbiology one-month rotation is not required, unless the fellow did not participate during the first year.
Goals and Objectives
By the end of this rotation, the fellow is expected to:
Teaching Methods
Daily plate rounds with the Clinical Microbiology Lab: Complete bench rotations on checklist. Work with pathology resident on service to organize micro rounds with the ID consult Team I.
Microbiology lecture block, monthly micro conference
Allergy/Immunology Rotation (elective)
Pediatric Infectious Disease Rotation (elective)
ID Week
Second meeting of fellow’s choice (During Year 2 depending on track)
Training towards several degrees or participation in advanced training programs can occur during a 3rd and 4th year of fellowship. These include:
Several funding opportunities are listed below for trainees who perform a third (and often a fourth) year of fellowship. There are visa limitations for several of the grants listed below. Tuition support for graduate work has been available for fellows during their research years.
The Division of Infectious Diseases offers a broad range of research opportunities, with faculty members conducting laboratory research in innate immunity, host-pathogen interactions, parasitology, and virology. There are also opportunities for projects in medical microbiology, antimicrobial stewardship, hospital epidemiology and infection prevention, healthcare delivery and quality improvement, computational epidemiology and with the Vaccine Trials Unit. See below for more detailed information about specific programs or faculty members.
Two to three months of the first year are not assigned to clinical rotations. Part of this time is vacation. During the remaining time, the fellow is expected to meet with faculty members within or outside the division to discuss possible scholarly projects. Under faculty members’ mentorship, we anticipate that by the end of year 1 a project has been selected.
Scholarly work can include ID-related quality improvement projects, Antimicrobial Stewardship projects or research initiatives, Hospital Epi research, or clinical reviews/case series, bench research or clinical research.
Three to four months of the year are dedicated to consult work. Thus, the second year of fellowship allows for significant time to develop and execute a scholarly project. A mentor will guide the project, and a research committee or co-mentor selected from other faculty members will provide additional guidance as needed. Results of the fellows’ work will be presented during the ID Faculty and Fellows’ Conference toward the end of year 2.
A third (and often a fourth) year of fellowship is available for those who plan a career in academics and are engaged in a fruitful research project during clinical fellowship (see Fellowship Tracks). Building on productive scholarly work initiated during Year 2, the majority of Year 3 and 4 are dedicated to research/scholarly work and possibly course work
Joseph Tholany (graduating 2022)
Tholany, J, Kobayashi, T, Marra, AR, Schweizer, ML, Samuelson, RJ, Suzuki, H. Impact of infectious diseases consultation on the outcome of patients with enteroccoal bacteremia: a systemic literature review and meta-analysis. OFJD, ofac200, epublished April 12, 2022; https://doi.org/10.1093/ofid/ofac200
Matthew Smith (graduating 2022)
Smith M, Kobayashi T, Sekar P. Antibody testing to distinguish between histoplasmosis and blastomycosis. BMJ Case Rep. 2021 May 31;14(5):e243587. doi: 10.1136/bcr-2021-243587.
Livorsi, DJ, Nair, R, Dysangco, A, Aylward, A, Alexander, B, Smith, MW, Kouba, S, Perencevich, EN. Using audit-and-feedback to improve antimicrobial-prescribing in Emergency Departments: a multicenter quasi-experimental study in the Veterans Health Administration. Open Forum Infectious Diseases, ofab186, April 14, 2021.
Fernando Casado Castillo (graduated 2021)
Casado-Castillo F, Kobayashi T, Sekar P, Streit J, Molano De Pena I. Prosthetic hip infection due to Salmonella enterica serovar Enteritidis. IDCases. 2021 May 23;25:e01170. doi: 10.1016/j.idcr.2021.e01170.
Kobayashi T, Trannel A, Holley SA, Alsuhaibani M, Abosi OJ, Jenn KE, Meacham H, Sheeler LL, Etienne W, Dains A, Casado F, Kukla ME, Ward E, Ford B, Edmond MB, Wellington M, Diekema DJ, Salinas JL. COVID-19 Serial Testing among Hospitalized Patients in a Midwest Tertiary Medical Center, July-September 2020. Clin Infect Dis. 2020 Oct 26:ciaa1630. doi: 10.1093/cid/ciaa1630. Online ahead of print.PMID: 33103196
Edin Pujagic (graduated 2021)
Kobayashi, T, Bogdanic, F, Pujagic, E, Goto, M. Isolated Splenic Abscess due to Salmonella Berta in a Healthy Adult. BMJ Case Rep. 2020 Apr 7;13(4). pii: e235318. doi: 10.1136/bcr-2020-235318
Htay Phyu (graduated 2020)
Phyu, H, Edmond, MB, Kobayashi, T. Metronidazole-Induced Encephalopathy ID Cases. 2019 Sep 7; 18:e00639 doi: 10.1016/j.idcr.2019.e00639. eCollection 2019. PMID 31692663
Phyu, H, Kobayashi, T., Rastogi, P, Cho, C. Vancomycin-induced linear Immunogloblulin A bullous dermatosis. BMJ Case Reports, Dec 2019, 12(12) e233281: DOI: 10.1136/bcr-2019-233281 PMID 31822537
Phyu H, Kobayashi T, Ford, B, Molano, I. Splenic abscess as a rare presentation of blastomycosis. BMJ Case Rep. 2020 Feb 13; 13(2). Pii: e234062. Doi: 10.1136/bcr-2019-234062 PMID 32060116
Takaaki Kobayashi (graduated 2020)
Kobayashi T, Trannel A, Holley SA, Alsuhaibani M, Abosi OJ, Jenn KE, Meacham H, Sheeler LL, Etienne W, Dains A, Casado F, Kukla ME, Ward E, Ford B, Edmond MB, Wellington M, Diekema DJ, Salinas JL. COVID-19 Serial Testing among Hospitalized Patients in a Midwest Tertiary Medical Center, July-September 2020. Clin Infect Dis. 2020 Oct 26:ciaa1630. doi: 10.1093/cid/ciaa1630. Online ahead of print.PMID: 33103196
Kobayashi T, Amram AL, Gehrs K, Diekema D, Barker J. A 52-Year-Old Man With Uveitis and Altered Mental Status. Clin Infect Dis. 2021 Mar 1;72(5):873-875. doi: 10.1093/cid/ciaa051.PMID: 33667312
Kobayashi T, Salinas JL, Ten Eyck P, Chen B, Ando T, Inagaki K, Alsuhaibani M, Auwaerter PG, Molano I, Diekema DJ. Palliative care consultation in patients with Staphylococcus aureus bacteremia. Palliat Med. 2021 Apr;35(4):785-792. doi: 10.1177/0269216321999574. Epub 2021 Mar 24.PMID: 33757367
Kobayashi T, Marra AR, Schweizer ML, Ten Eyck P, Wu C, Alzunitan M, Salinas JL, Siegel M, Farmakiotis D, Auwaerter PG, Healy HS, Diekema DJ. Impact of Infectious Disease Consultation in Patients With Candidemia: A Retrospective Study, Systematic Literature Review, and Meta-analysis. Open Forum Infect Dis. 2020 Aug 3;7(9):ofaa270. doi: 10.1093/ofid/ofaa270. eCollection 2020 Sep.PMID: 32904995
Kobayashi T, Beck B, Miller A, Polgreen P, O'Shea AMJ, Ohl ME. Positive Predictive Values of 2 Algorithms for Identifying Patients with Intravenous Drug Use-Associated Endocarditis Using Administrative Data. Open Forum Infect Dis. 2020 Jun 1;7(6):ofaa201. doi: 10.1093/ofid/ofaa201. eCollection 2020 Jun.PMID: 32607386
Kobayashi T, Jenn KE, Bowdler N, Malloy R, Holley S, Izakovic T, Kukla ME, Abosi O, Dains A, Meacham H, Diekema DJ, Edmond MB, Salinas JL. Reduction in abdominal hysterectomy surgical site infection rates after the addition of anaerobic antimicrobial prophylaxis. Infect Control Hosp Epidemiol. 2020 Dec;41(12):1469-1471. doi: 10.1017/ice.2020.386. Epub 2020 Aug 28.PMID: 32856576
Kobayashi T, Meacham H, Alsuhaibani M, Holley S, Marra AR, Edmond MB, Diekema DJ, Hartley PG, Salinas JL. Occupational tuberculosis exposures and conversion rates can guide deimplementation of annual tuberculosis skin test screening. Infect Control Hosp Epidemiol. 2021 Jan;42(1):123-124. doi: 10.1017/ice.2020.205. Epub 2020 Jun 2.PMID: 32484119
Kobayashi T, Clore GS, Kukla ME, Alzunitan M, Kritzman J, Abosi O, Puig-Asensio M, Marra AR, Diekema DJ, Edmond MB, Salinas JL. Insertion site inflammation was associated with central-line-associated bloodstream infections at a tertiary-care center, 2015-2018. Infect Control Hosp Epidemiol. 2021 Mar;42(3):348-350. doi: 10.1017/ice.2020.445. Epub 2020 Oct 9.PMID: 33032671
Kobayashi T, Ford B, Fujita N, Appenheimer AB. Ocular Actinomycosis Mimicking Meningioma. Open Forum Infect Dis. 2020 May 19;7(6):ofaa170. doi: 10.1093/ofid/ofaa170. eCollection 2020 Jun.PMID: 32529000
Kobayashi T, Lawler E, Samra H, Ford B, Sekar P. Prosthetic Finger Joint Infection Due to Aspergillus terreus. Open Forum Infect Dis. 2020 Dec 13;8(1):ofaa614. doi: 10.1093/ofid/ofaa614. eCollection 2021 Jan.PMID: 33511236
Kobayashi T, Ando T, Streit J, Sekar P. Current Evidence on Oral Antibiotics for Infective Endocarditis: A Narrative Review. Cardiol Ther. 2019 Dec;8(2):167-177. doi: 10.1007/s40119-019-00148-4. Epub 2019 Sep 18.PMID: 31535282
Sammantha Kouba (graduated 2020)
Kouba SJ, Kobayashi T, Blount RJ, Herwaldt L. Atrial flutter as a rare manifestation of leptospirosis. BMJ Case Rep. 2020 Aug 26:13(8)e237693 PMID 32847893
Kouba S, Kobayashi T, Meier J, Sekar, P. Osseous blastomycosis mimicking malignancy. BMJ Case Rep. 2020 Aug 25;13(8):e237688 PMID 32843470
Livorsi, DJ, Nair, R, Dysangco, A, Aylward, A, Alexander, B, Smith, MW, Kouba, S, Perencevich, EN. Using audit-and-feedback to improve antimicrobial-prescribing in Emergency Departments: a multicenter quasi-experimental study in the Veterans Health Administration. Open Forum
Hiroyuki Suzuki (graduated 2019)
Suzuki H, Perencevich EN, Livorsi DJ, Alexander B, Beck BF, Richardson KK, Goto M. Attributable mortality due to fluoroquinolone and extended-spectrum cephalosporin resistance in hospital-onset Escherichia coli and Klebsiella spp bacteremia: A matched cohort study in 129 Veterans Health Administration medical centers. Infect Control Hosp Epidemiol. 2019 Aug;40(8):928-931.
Suzuki H, Perencevich EN, Alexander B, Beck BF, Goto M, Lund BC, Nair R, and Livorsi DJ. Inpatient Fluoroquinolone Stewardship Improves the Quantity and Quality of Fluoroquinolone-prescribing at Hospital Discharge: A Retrospective Analysis among 122 Veterans Health Administration Hospitals. Clin Infect Dis. 2020 Aug 22;71(5):1232-1239.
Suzuki H, Perencevich EN, Nair R, Livorsi DJ, Goto M. Excess Length of Acute Inpatient Stay Attributable to Acquisition of Hospital-Onset Gram-Negative Bloodstream Infection with and without Antibiotic Resistance: A Multistate Model Analysis. Antibiotics 2020, 9(2), 96
Suzuki H, Clore G, Perencevich EN, Hockett-Sherlock S, Goto M, Nair R, Branch-Elliman W, Richardson K, Gupta K, Beck BF, Alexander B, Balkenende E, Schweizer ML. Development of a Fully Automated Surgical Site Infection Detection Algorithm for Use in Cardiac and Orthopedic Surgery Research. Infect Control Hosp Epidemiol. 2021 Feb 23;1-6.
Suzuki H, Perencevich EN, Goto M, Nair R, Puig-Asensio M, Ernst E, Livorsi DJ. A Comprehensive Assessment of Carbapenem Use across 90 Veterans Health Administration Hospitals with Defined Stewardship Strategies for Carbapenems. J Antimicrob Chemother. 2021 Feb 1;dkab008.
Christine Cho (graduated 2017)
Cho C, Teghanemt A, Apicella MA, Nauseef WM. Modulation of phagocytosis-induced cell death of human neutrophils by Neisseria gonorrhoeae. J Leukoc Biol. 2020 September 25. doi: 10.1002/JLB.4MA0820-649R.
Kobayashi T, Swick BL, Cho C. Clinical image: chronic skin ulcers in a patient with rheumatoid arthritis on immunosuppressant therapy. Clin Rheumatol. 2020 Jun 26. doi:10.1007/s10067-020-05251-9.
Phyu H, Kobayashi T, Cho C, Rastogi P. Vancomycin-Induced Linear Immunoglobulin A Bullous Dermatosis. BMJ Case Reports. 2019;12:e233281.
Kobayashi T, Cho C. Mediastinal granuloma due to histoplasmosis in a patient on infliximab. Cleveland Clinic Journal of Medicine. 2019;86(9):579-581.
Benjamin Avner (graduated 2017)
Amjadi MF, Avner BS, Greenlee-Wacker MC, Horswill AR, Nauseef WM (2021). Neutrophil-derived extracellular vesicles modulate the phenotype of naïve human neutrophils. J Leukoc Biol (published online ahead of print) PMID 33682200
Alpheus (Benjamin) Appenheimer (graduated 2016)
Appenheimer AB, Bokhour B, McInnes DK, Richardson KK, Thurman AL, Beck BF, Vaughan-Sarrazin M, Asch SM, Midboe AM, Taylor T, Dvorin K, Gifford AL, Ohl ME. Should HIV Specialty Clinics Treat Patients with Hypertension or Refer to Primary Care? An Analysis of Treatment Outcomes. Open Forum Infectious Diseases. 2017 Feb 3;4(1):ofx005.
Julian KG, Crook T, Curley E, Appenheimer AB, Paules CI, Hasse B, Diekema DJ, Daley CL, de Sanctis J, Hellinger WC, Levin A, McSherry G, Freer C, Whitener CJ. Long-term follow-up of post-cardiac surgery Mycobacterium chimaera infections: A 5-center case series. J Infect. 2020 Feb;80(2):197-203
Kobayashi T, Ford, B, Fujita, N, Appenheimer, AB. Ocular actinomycosis mimicking meningioma, Open Forum Infectious Diseases. 2020 June; 7 (6): ofaa170
Thulasi P, Saeed HN, Rapuano CJ, Hou JH, Appenheimer AB, Chodosh J, Kang JJ, Morrill AM, Vyas N, Zegans ME, Zuckerman R, Tu EY. Oral Miltefosine as Salvage Therapy for Refractory Acanthamoeba Keratitis. Am J Ophthalmol. 2020 Oct 10;223:75-82. doi: 10.1016/j.ajo.2020.09.048. Epub ahead of print. PMID: 33045218
Kunatum Prasidthrathsint (graduated 2015)
Shah NS, Greenberg JA, McNulty MC, Gregg KS, Riddell IV J, Mangino JE, Weber DM, Hebert CL, Marzec NS, Barron MA, Chaparro-Rojas F, Restrepo A, Hemmige V, Prasidthrathsint K, Cobb S, Herwaldt, L, Raabe, V, Cannavino, CR, Green Hines A, Bares SH, Antiporta PB, Scardina T, Patel U, Reid G, Mohazabnia P, Kachhdiya S, Le B-M, Park CJ, Ostrowsky B, Robicsek A, Smith BA, Schied J, Bhatti MM, Mayer S, Sikka M, Murphy-Aguilu I, Patwari P, Abeles SR, Torriani FJ, Abbas Z, Toya S, Doktor K, Chakrabarti A, Doblecki-Lewis S, Looney DJ, David MZ. Severe Influenza in 33 US Hospitals, 2013–2014: Complications and Risk Factors for Death in 507 Patients. Infection Control & Hospital Epidemiology, July 2015;00(0):1-10
Shah NS, Greenberg JA, McNulty MC, Gregg KS, Riddell J, Mangino JE, Weber DM, Hebert CL, Marzec NS, Barron MA, Chaparro-Rojas F, Restrepo A, Hemmige V, Prasidthrathsint K, Cobb S, Herwaldt L, Raabe V, Cannavino CR, Hines AG, Bares SH, Antiporta PB, Scardina T, Patel U, Reid G, Mohazabnia P, Kachhdiya S, Le BM, Park CJ, Ostrowsky B, Robicsek A, Smith BA, Schied J, Bhatti MM, Mayer S, Sikka M, Murphy-Aguilu I, Patwari P, Abeles SR, Torriani FJ, Abbas Z, Toya S, Doktor K, Chakrabarti A, Doblecki-Lewis S, Looney DJ, David MZ. Severe Influenza in 33 US Hospitals, 2013-2014: Complications and Risk Factors for Death in 507 Patients. Infect Control Hosp Epidemiol. 2015 Nov; 36(11):1251-60
Shah NS, Greenberg JA, McNulty MC, Gregg KS, Riddell J 4th, Mangino JE, Weber DM, Hebert CL, Marzec NS, Barron MA, Chaparro-Rojas F, Restrepo A, Hemmige V, Prasidthrathsint K, Cobb S, Herwaldt L, Raabe V, Cannavino CR, Hines AG, Bares SH, Antiporta PB, Scardina T, Patel U, Reid G, Mohazabnia P, Kachhdiya S, Le BM, Park CJ, Ostrowsky B, Robicsek A, Smith BA, Schied J, Bhatti MM, Mayer S, Sikka M, Murphy-Aguilu I, Patwari P, Abeles SR, Torriani FJ, Abbas Z, Toya S, Doktor K, Chakrabarti A, Doblecki-Lewis S, Looney DJ, David MZ. Bacterial and viral co-infections complicating severe influenza: incidence and impact among 507 U.S. Patients 2013-2014. J Clin Virol. 2016 Jul;80:12-9
Prasidthrathsint K, Voigt M, Streit JS. Association of Q Fever with Autoimmune Hepatitis. J of Autoimmune Disorders, 1:1, 2015
Prasidthrathsint, K., Lewis, J. & Couturier, M. R. (2017). The Brief Case: Angiostrongylus cantonensis Eosinophilic Meningitis in a Returned Traveler. (Vols. 55). (10), pp. 2880-2883. Journal of clinical microbiology. PMID: 28947508. 2017
Prasidthrathsint, K., Fisher, M. A. (2017). Antimicrobial Susceptibility Patterns among a Large, Nationwide Cohort of Abiotrophia and Granulicatella Clinical Isolates. Journal of clinical microbiology, 55(4), 1025-1031. PMID: 28077699. 2017
Prasidthrathsint K, Stapleton JT. Laboratory Diagnosis and Monitoring of Viral Hepatitis. Gastroenterol Clin North Am. 2019 Jun;48(2):259-279. PMID 31046974
Michihiko Goto (graduated 2014)
All citations can be reviewed at: https://www.ncbi.nlm.nih.gov/myncbi/michihiko.goto.1/bibliography/public/
Goto M, Harris AD, Perencevich EN. Contact Precautions and Methicillin-Resistant Staphylococcus aureus-Modeling Our Way to Safety. JAMA Netw Open. 2021 Mar 1;4(3):e211574. doi: 10.1001/jamanetworkopen.2021.1574. PubMed PMID: 33720366.
Goto M, Ueckert N, Meiches RK, Perencevich EN. Successful multimodal measures preventing coronavirus disease 2019 (COVID-19) outbreaks without universal frequent testing within long-term care units in the Midwestern Veterans' Health Care Network. Infect Control Hosp Epidemiol. 2021 Jan 11;:1-3. doi: 10.1017/ice.2020.1419. [Epub ahead of print] PubMed PMID: 33427153; PubMed Central PMCID: PMC7853753.
Feller J, Lund BC, Perencevich EN, Alexander B, Heintz B, Beck B, Nair R, Goto M, Livorsi DJ. Post-discharge oral antimicrobial use among hospitalized patients across an integrated national healthcare network. Clin Microbiol Infect. 2020 Mar;26(3):327-332. doi: 10.1016/j.cmi.2019.09.016. Epub 2019 Oct 7. PubMed PMID: 31600582.
Suzuki H, Perencevich EN, Nair R, Livorsi DJ, Goto M. Excess Length of Acute Inpatient Stay Attributable to Acquisition of Hospital-Onset Gram-Negative Bloodstream Infection with and without Antibiotic Resistance: A Multistate Model Analysis. Antibiotics (Basel). 2020 Feb 23;9(2). doi: 10.3390/antibiotics9020096. PubMed PMID: 32102195; PubMed Central PMCID: PMC7168210.
Goto M, Jones MP, Schweizer ML, Livorsi DJ, Perencevich EN, Richardson K, Beck BF, Alexander B, Ohl ME. Association of Infectious Diseases Consultation With Long-term Postdischarge Outcomes Among Patients With Staphylococcus aureus Bacteremia. JAMA Netw Open. 2020 Feb 5;3(2):e1921048. doi: 10.1001/jamanetworkopen.2019.21048. PubMed PMID: 32049296.
Eiyu Matsumoto (graduated 2013)
Suzuki, H, Carlson JR, Matsumoto E. Treatment of Enterococcus faecalis infective endocarditis with penicillin G plus ceftriaxone. Infect Dis (Lond). 2020 Feb: 52(2): 135-138, PMID 31566044
Matsumoto, S., Matsumoto, E. A Case Report “A 20-Month-Old Girl With Fever, Seizures, Hemiparesis, and Brain Lesions Requiring a Diagnostic Brain Biopsy.” Seminars in Pediatric Neurology (available online, https://doi.org/10.1016/j.spen.2017.03.012)
Matsumoto, E., Carlson, J., Mini-Review for Clinicians, UTI Case Study 1”. Consultant. 2017;57(8):464-467. (last accessed on 12/12/2017.)
Matsumoto, E., Carlson, J., Xu, A., Mini-Review for Clinicians, UTI Case Study 2. Consultant. 2017;57(9):526-529. (last accessed on 12/12/2017)
Matsumoto, E., Carlson, J., Xu, A., Mini-Review, Recurrent C. difficile Infection, Case-Based-Approach. Consultant. 2017;57(10):583-587. (Last accessed on 12/12/2017.)
Matsumoto, E., Miller, S., Dika, M., Ferguson, N., Holte, A., Carlson, J., Photo Quiz 360, A thumb lesion in a farmer; Orf (Ecthyma Contagiosum). Consultant. 2017;57(10):609. (Last accessed on 12/12/2017.)
Matsumoto, E., Carlson, J., How Would You Triage This Patient’s Low Back Pain? (last accessed in 3/2019)
Streit JA, Matsumoto E. African Trypanosomiasis. N Engl J Med. 2016;375(24):2380. PMID: 27974038.
Hospital Epidemiology/Epidemiology of Infections/Healthcare Quality
Host defense/Inflammation (Faculty members of the Inflammation Program)
Global Health and Parasitology Research
Clinical Research/Translational Research
Medical Microbiology
Emerging Infections Network
Clinical Reviews or Case Series/Case Reports
Medical Education
Below is an example of the Department of Internal Medicine Common Curriculum Schedule. It is shared between Fellows from all divisions of the Department.
The Fellows as Clinician Educators (FACE) Program is designed to introduce future clinician-educators to a set of skills which may be of use in their career. The program presents concepts of educational design and research, lecture development, evaluation, observation and feedback. At the conclusion of the program, FACE participants are required to develop a teaching portfolio.
University of Iowa Hospitals & Clinics offers the best traditions in academic excellence, collaborative patient care and innovative research, with the added benefits of Iowa City's affordable living, healthy lifestyle, and appreciation for the arts. Highlights of training at Iowa include:
Thank you for your interest in infectious diseases, an incredibly rich, diverse, and rewarding specialty. As is evidenced by the ongoing COVID-19 pandemic, the bounds of our specialty know no limits, spanning pathogenesis, clinical care, disaster planning, infection control and prevention, immunology and vaccine development, public health, social determinants of health, diagnostic testing, and communication skills. While the task is daunting, we will overcome this pandemic, in large part thanks to the tireless efforts of infectious diseases experts and advocates everywhere.
IDSA, the ID Training Program Directors’ Committee, and all ID program directors understand that the fellowship application season falls during this complex and chaotic time. We also understand that some anticipated ID clinical elective rotations may not be undertaken, that anticipated research projects may not be completed, and that previously envisioned letters of recommendation may not materialize. We assure you that we will review all applications mindful of these realities, and we will not hold schedule changes imposed by COVID-19 against any applicant. We strongly encourage anyone who is considering applying for ID fellowship training to apply, and not to withhold your application because of these concerns. We welcome your interest in infectious diseases and our program, and we look forward to meeting many of you on the interview trail this year, whether in person or remotely |
Applications are only accepted through the Electronic Residency Application System (ERAS).
US residents should contact their Dean's Office or ERAS at https://students-residents.aamc.org/training-residency-fellowship/applying-fellowships-eras/.
International residents should contact the ECFMG at http://www.ecfmg.org/eras/index.html. Sponsorship of J-1 visas is preferred (on occasion H-1b).
An ECFMG certificate must accompany the ERAS application.
A background of research experience is not essential. However, we would encourage applicants who have a strong interest in pursuing an academic Infectious Diseases career. Our research programs range from Clinical Infectious Diseases (antibiotic stewardship, transplantation), Epidemiology (infection control, emerging infections network), Translational Research (vaccines, clinical trials, antibiotic/antifungal resistance), and Basic Research (virology, parasitology, bacteriology, and innate and adaptive immunity).
A complete ERAS application includes:
All applicants must also register with the National Resident Matching Program (Phone: 202-828-0566).
The NRMP numbers for our program is 1203146F0.
The deadline for applications is September 30.
Selected candidates will be invited to interview.
The deadline for applications is September 30.
Medical specialty certification in the United States is a voluntary process which serves multiple purposes for the trainee and the public.
Certification is
For more information visit the American Board of Internal Medicine for specifics on board certification requirements.
Qualifications for candidates include (1) an MD degree (or equivalent), (2) completion or expected completion of three years of residency training in Internal Medicine, with Board Eligibility or Certification by the American Board of Internal Medicine, by the initiation of Infectious Diseases Fellowship training
At the interview, perspective candidates will receive an overview of the program and tour of the facilities. They will also meet individually with key faculty members that may include any or all of the following: the program director, other Infectious Diseases faculty, and the department chair.
Judy A. Streit, MD
Director, Infectious Diseases Fellowship Program
Clinical Professor of Internal Medicine
A. Benjamin Appenheimer, MD
Assistant Director, Infectious Diseases Fellowship Program
Clinical Associate Professor of Internal Medicine
Ilonka Molano, MD
Assistant Director, Infectious Diseases Fellowship Program
Clinical Associate Professor of Internal Medicine
The Department of Internal Medicine has a faculty of nearly 300 professionals whose clinical, teaching, and research expertise spans the entire discipline of medicine.
Infectious Diseases Division Faculty
Department Faculty (alphabetical listing)
Perencevich, Eli N., MD, MS (General Internal Medicine)
Ford, Bradley, MD, PhD (Pathology)
Nirmal Muthukumarasamy, MBBS (F1)
Medical School: Jawaharlal Institute
Residency: Western Michigan University
Mike Olthoff, MD (F2)
Medical School: University of Iowa
Residency: University of Iowa
Abhishek Pandya, MD (F1)
Medical School: St. James School of Medicine, St Vincent and the Grenadines
Residency: Loyola University
Andrew Simms, MD (F1)
Medical School: University of Nebraska
Residency: University of Iowa
Thomas Wright, MD (F1)
Medical School: Indiana University
Residency: Summa Health System
Matt Smith, MD
VA Health Services Research Fellow
Medical School: University of Nebraska
Residency: University of Iowa
Joseph Tholany, MD
VA Quality Scholar
Medical School: St. George's University School of Medicine
Residency: University of Pittsburgh
Botond Bánfi, MD, PhD Associate Professor of Anatomy and Cell Biology |
Polly Ferguson, MD Professor of Pediatrics |
Prajwal Gurung, PhD Associate Professor of Medicine (Infectious Diseases) |
John T. Harty, PhD* Professor of Microbiology |
Priya Issuree, PhD Assistant Professor of Medicine (Infectious Diseases) |
Julia Klesney-Tait, MD, PhD Associate Professor of Medicine (Pulmonary) |
Kevin Legge, PhD Professor of Pathology |
Thorsten Maretzky, PhD Assistant Professor of Medicine (Infectious Diseases) |
Paul McCray, MD Professor of Pediatrics |
Craig Morita, MD, PhD Professor of Medicine (Rheumatology) |
William M. Nauseef, MD* Emeritus Professor of Medicine (Infectious Diseases) |
Elizabeth Newell, MD Assistant Professor of Pediatrics |
Stanley Perlman, MD, PhD* Professor of Microbology |
Mary E. Wilson, MD Professor of Medicine and Microbiology |
Zuhair Ballas, MD Professor of Medicine (Allergy) |
Gail Bishop, PhD Professor of Medicine and Microbiology |
Charles Grose, MD Professor of Pediatrics |
Hillel Haim, PhD Assistant Professor of Microbiology |
Aloysius J. Klingelhutz, PhD Professor of Microbiology |
Wendy Maury, PhD Professor of Microbiology |
Jeffery Meier, MD Professor of Medicine (Infectious Diseases) |
Stanley Perlman, MD, PhD Professor of Microbiology |
David Price, PhD Professor, Department of Biochemistry |
Richard J. Roller, PhD Professor of Microbiology |
Jack Stapleton, MD Professor of Medicine (Infectious Diseases) |
C. Martin Stoltzfus, PhD Professor of Medicine (Microbiology) |
Joseph Zabner, MD Professor of Medicine (Pulmonary) |
John T. Harty, PhD Professor of Medicine (Microbiology) |
Li Wu, PhD Professor and Chair, Department of Microbiology |
Paul McCray, MD* Professor of Pediatrics |
Craig Morita, MD, PhD* Professor of Medicine (Rheumatology) |
William M. Nauseef, MD* Emeritus Professor of Medicine (Infectious Diseases) |
Patricia L. Winokur, MD Professor of Medicine (Infectious Diseases) |
Associate Members |
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Steven Clegg, PhD Professor of Medicine (Microbiology) |
Daniel J. Diekema, MD, MS Associate Professor of Clinical Medicine (Infectious Diseases) |
Timothy L. Yahr, PhD Associate Professor of Microbiology |
Bradley Jones, PhD Professor of Microbiology |
Noah Butler, PhD Associate Professor of Microbiology and Immunology |
John T. Harty, PhD Professor of Microbiology |
Louis V. Kirchhoff, MD, MPH Professor of Medicine (Infectious Diseases) |
W. Scott Moye-Rowley, PhD Professor of Physiology & Biophysics |
Mary E. Wilson, MD Professor of Medicine (Infectious Diseases) |
Karen Brust, MD, Clinical Associate Professor of Medicine (Infectious Diseases) | Michihiko Goto, MD, MSCI, FACP Associate Professor of Medicine (Infectious Diseases) |
Loreen Herwaldt, MD Professor of Medicine (Infectious Disease) |
Takaaki Kobayashi, MD, MPH Clinical Assistant Professor of Medicine (Infectious Diseases) | Daniel Livorsi, MD, MSC Associate Professor of Medicine (Infectious Diseases) |
Michael Ohl, MD, MPH Professor of Medicine (Infectious Disease) |
Eli Perencevich, MD, MS Professor of Medicine and Epidemiology |
Philip Polgreen, MD, MPH Professor of Medicine (Infectious Disease) |
Patricia Winokur, MD Professor of Medicine (Infectious Disesse) |
Jack Stapleton, MD Professor of Medicine (Infectious Disease) |
Jeffery Meier, MD Professor of Medicine (Infectious Disease) |
Bradley Ford, MD, PhD Clinical Assistant Professor of Pathology |
J. Stacey Klutts, MD, PhD Assistant Professor of Pathology |
Kunatum (Jin) Prasidthrathsint, MD Clinical Assistant Professor of Medicine (Infectious Diseases) |
Isabella Grumbach, MD, PhD
Interim Chair and DEO, Department of Internal Medicine
Kate Daum Endowed Professor
Professor of Medicine – Cardiovascular Medicine
Professor of Radiation Oncology